STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98077.1Hypothetical protein; KEGG: lbr:LVIS_0030 1.5e-72 signal transduction histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK. (236 aa)    
Predicted Functional Partners:
EHL98076.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lbr:LVIS_0030 2.9e-147 signal transduction histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK; Psort location: CytoplasmicMembrane, score: 7.88.
     0.976
EHM00502.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lbr:LVIS_2056 1.6e-137 signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.930
EHL99021.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lcb:LCABL_07770 3.8e-97 ciaH; sensor protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.917
EHL97917.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lbr:LVIS_1017 3.0e-143 signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 7.88.
 
      0.899
EHL95679.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
      0.899
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
  0.852
EHL98075.1
YycH protein; Psort location: OuterMembrane, score: 9.49.
 
  
 0.834
EHL98078.1
Transcriptional regulatory protein WalR; KEGG: bde:BDP_0386 1.6e-52 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
  
  0.822
EHL98454.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lcb:LCABL_07770 1.1e-83 ciaH; sensor protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.801
EHL98930.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lca:LSEI_2680 2.2e-69 signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.783
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.