Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHL95945.1 | EHL95946.1 | HMPREF9103_02684 | HMPREF9103_02685 | Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | CHC2 zinc finger domain protein; KEGG: lbr:LVIS_0755 1.7e-12 DNA primase; K02316 DNA primase. | 0.815 |
| EHL95945.1 | EHL97552.1 | HMPREF9103_02684 | HMPREF9103_01916 | Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.403 |
| EHL95945.1 | EHL98079.1 | HMPREF9103_02684 | HMPREF9103_01735 | Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.946 |
| EHL95945.1 | EHL99220.1 | HMPREF9103_02684 | HMPREF9103_01048 | Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | KEGG: lpj:JDM1_0939 6.2e-271 pcrA; ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97. | 0.571 |
| EHL95945.1 | dnaX | HMPREF9103_02684 | HMPREF9103_02306 | Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.588 |
| EHL95946.1 | EHL95945.1 | HMPREF9103_02685 | HMPREF9103_02684 | CHC2 zinc finger domain protein; KEGG: lbr:LVIS_0755 1.7e-12 DNA primase; K02316 DNA primase. | Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | 0.815 |
| EHL95946.1 | EHL97552.1 | HMPREF9103_02685 | HMPREF9103_01916 | CHC2 zinc finger domain protein; KEGG: lbr:LVIS_0755 1.7e-12 DNA primase; K02316 DNA primase. | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.403 |
| EHL95946.1 | EHL98079.1 | HMPREF9103_02685 | HMPREF9103_01735 | CHC2 zinc finger domain protein; KEGG: lbr:LVIS_0755 1.7e-12 DNA primase; K02316 DNA primase. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.892 |
| EHL96281.1 | EHL98079.1 | HMPREF9103_02424 | HMPREF9103_01735 | Hypothetical protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.843 |
| EHL96281.1 | dnaA | HMPREF9103_02424 | HMPREF9103_01924 | Hypothetical protein. | Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.452 |
| EHL96652.1 | EHL97552.1 | HMPREF9103_02312 | HMPREF9103_01916 | KEGG: lbr:LVIS_0606 9.4e-78 DNA polymerase III subunit delta' K02341; Psort location: Cytoplasmic, score: 9.26. | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.824 |
| EHL96652.1 | EHL98079.1 | HMPREF9103_02312 | HMPREF9103_01735 | KEGG: lbr:LVIS_0606 9.4e-78 DNA polymerase III subunit delta' K02341; Psort location: Cytoplasmic, score: 9.26. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.813 |
| EHL96652.1 | dnaX | HMPREF9103_02312 | HMPREF9103_02306 | KEGG: lbr:LVIS_0606 9.4e-78 DNA polymerase III subunit delta' K02341; Psort location: Cytoplasmic, score: 9.26. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.958 |
| EHL97552.1 | EHL95945.1 | HMPREF9103_01916 | HMPREF9103_02684 | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | 0.403 |
| EHL97552.1 | EHL95946.1 | HMPREF9103_01916 | HMPREF9103_02685 | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | CHC2 zinc finger domain protein; KEGG: lbr:LVIS_0755 1.7e-12 DNA primase; K02316 DNA primase. | 0.403 |
| EHL97552.1 | EHL96652.1 | HMPREF9103_01916 | HMPREF9103_02312 | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | KEGG: lbr:LVIS_0606 9.4e-78 DNA polymerase III subunit delta' K02341; Psort location: Cytoplasmic, score: 9.26. | 0.824 |
| EHL97552.1 | EHL98079.1 | HMPREF9103_01916 | HMPREF9103_01735 | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.798 |
| EHL97552.1 | EHM01451.1 | HMPREF9103_01916 | HMPREF9103_00074 | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Primosomal protein DnaI; Psort location: Cytoplasmic, score: 8.96. | 0.406 |
| EHL97552.1 | dnaA | HMPREF9103_01916 | HMPREF9103_01924 | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.533 |
| EHL97552.1 | dnaX | HMPREF9103_01916 | HMPREF9103_02306 | Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.830 |
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