STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98026.1Transcriptional regulator, MarR family. (142 aa)    
Predicted Functional Partners:
EHL98025.1
Hypothetical protein; KEGG: bce:BC5408 7.1e-25 2-haloalkanoic acid dehalogenase K01560.
    
  0.801
EHL98024.1
Hypothetical protein; KEGG: btl:BALH_4908 1.0e-23 HAD superfamily hydrolase K01560.
    
  0.681
EHL95334.1
Hypothetical protein; KEGG: eci:UTI89_C1627 0.00032 entS; EntS/YbdA MFS transporter.
  
     0.666
EHL98027.1
KEGG: lbr:LVIS_0491 5.7e-197 acetolactate synthase K01652; Psort location: Cytoplasmic, score: 9.26; Belongs to the TPP enzyme family.
 
    0.656
EHL98028.1
KEGG: lbr:LVIS_0492 3.1e-79 alpha-acetolactate decarboxylase; K01575 acetolactate decarboxylase; Psort location: Cytoplasmic, score: 8.96.
 
    0.620
EHM00492.1
Hypothetical protein; KEGG: lki:LKI_01315 1.2e-20 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
  
     0.613
EHL96160.1
KEGG: hel:HELO_3965 1.2e-10 auxin efflux carrier; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.598
EHL97647.1
Iron transport-associated domain protein; KEGG: ooe:OEOE_1199 3.2e-07 LysM repeat-containing muramidase; K01185 lysozyme; Psort location: Extracellular, score: 9.65; overlaps another CDS with the same product name.
  
     0.495
EHM00553.1
ABC transporter, substrate-binding protein, QAT family; KEGG: saa:SAUSA300_0707 6.7e-123 osmoprotectant ABC transporter, permease K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.485
EHL97600.1
PAP2 family protein; KEGG: cgl:NCgl1145 4.2e-82 cgl1192; serine protease K01362.
  
  
  0.479
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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