STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98033.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (257 aa)    
Predicted Functional Partners:
EHL98032.1
KEGG: bao:BAMF_0425 8.2e-47 ydbJ; putative ABC transporter (ATP-binding protein) YdbJ; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.992
EHM00903.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bao:BAMF_3227 1.1e-40 spaF; SpaF; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.831
EHL98714.1
Hypothetical protein; KEGG: ljf:FI9785_1494 2.3e-12 ABC transporter ATPase component K09687.
  
 0.829
EHM01465.1
ABC transporter, ATP-binding protein EcsA; KEGG: snc:HMPREF0837_10816 9.7e-76 skfE; putative sulfate-transporting ATPase; Psort location: Cytoplasmic, score: 9.12.
  
 0.816
EHM01082.1
KEGG: llk:LLKF_0994 1.1e-81 yjjC; ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.816
EHM01091.1
Hypothetical protein; KEGG: dvm:DvMF_0118 1.1e-14 ABC transporter related; K09817 zinc transport system ATP-binding protein.
  
 0.816
EHM01092.1
Hypothetical protein; KEGG: pmf:P9303_06461 9.3e-11 ccmA; putative multidrug efflux ABC transporter K09687.
  
 0.816
EHL98246.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_761 6.2e-168 ABC transporter ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.816
EHL97651.1
ABC transporter, ATP-binding protein; KEGG: lbr:LVIS_0701 1.2e-61 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.816
EHL97418.1
KEGG: lmh:LMHCC_1698 8.2e-63 Nod factor export ATP-binding protein I (nodulation ATP-binding protein I); Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.816
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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