STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL98035.1Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (195 aa)    
Predicted Functional Partners:
EHL98034.1
KEGG: ppe:PEPE_0484 0. anaerobic ribonucleoside triphosphate reductase K00527; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.996
folE
GTP cyclohydrolase I; KEGG: lhe:lhv_1202 6.3e-143 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/GTP cyclohydrolase I; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K01495; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.768
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.653
EHL95223.1
Amidophosphoribosyltransferase; KEGG: lpl:lp_2723 2.0e-162 purF; amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.564
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.472
EHL98032.1
KEGG: bao:BAMF_0425 8.2e-47 ydbJ; putative ABC transporter (ATP-binding protein) YdbJ; Psort location: CytoplasmicMembrane, score: 7.88.
       0.429
EHL98033.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.429
EHL96075.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
     
 0.411
EHL96641.1
KEGG: lbr:LVIS_0595 3.7e-147 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526.
     
 0.410
EHL98069.1
Putative rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
   
    0.408
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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