STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97970.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (224 aa)    
Predicted Functional Partners:
EHL99279.1
Hypothetical protein.
  
     0.603
dacA
TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.577
EHL95432.1
Hypothetical protein.
  
    0.554
EHL95874.1
Transcriptional regulator, MarR family.
  
     0.535
EHL98577.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.532
EHM00634.1
Hypothetical protein; KEGG: par:Psyc_1270 0.0075 algW; serine protease; K04691 serine protease DegS; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.524
EHM00100.1
Hypothetical protein; KEGG: vfi:VF_1261 6.6e-06 lactoylglutathione lyase family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.514
EHL95967.1
HAD hydrolase, family IA, variant 1; KEGG: lsl:LSL_0824 3.7e-35 phosphoglycolate phosphatase.
  
     0.494
EHL95419.1
FeoA domain protein.
  
     0.477
EHM00084.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.473
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.