STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97917.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lbr:LVIS_1017 3.0e-143 signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 7.88. (521 aa)    
Predicted Functional Partners:
EHL97916.1
KEGG: rha:RHA1_ro05622 1.2e-36 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
 0.978
EHL97915.1
Hypothetical protein; KEGG: chu:CHU_3042 0.0036 two-component response regulator K02483.
 
 0.968
EHL98077.1
Hypothetical protein; KEGG: lbr:LVIS_0030 1.5e-72 signal transduction histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK.
 
      0.899
EHL98929.1
KEGG: rha:RHA1_ro05622 1.4e-49 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
 0.892
EHM00633.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: bde:BDP_0386 1.1e-44 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
 0.872
EHL98078.1
Transcriptional regulatory protein WalR; KEGG: bde:BDP_0386 1.6e-52 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
 0.871
EHL95681.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 0.860
EHM00501.1
Putative transcriptional regulatory protein ResD; KEGG: fal:FRAAL1628 4.5e-39 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.97.
 
  0.859
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
  0.852
EHL99020.1
Putative response regulator ArlR; KEGG: rru:Rru_A0525 3.7e-35 two component transcriptional regulator / cell cycle transcriptional regulator CtrA K13584; Psort location: Cytoplasmic, score: 9.97.
 0.828
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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