STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97885.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
EHL96970.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.974
EHL97884.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.604
EHL99065.1
Hypothetical protein; KEGG: lla:L87107 3.8e-12 pspA; glucosyltransferase-S.
  
     0.588
EHM00267.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.505
EHL96649.1
Hypothetical protein.
  
     0.488
EHL97907.1
Hypothetical protein; KEGG: tcu:Tcur_3468 0.00086 DNA primase catalytic core domain protein; K02316 DNA primase.
  
     0.475
EHL95350.1
Hypothetical protein; KEGG: afw:Anae109_3812 1.1e-08 dimethyladenosine transferase; K02528 dimethyladenosine transferase; Psort location: Extracellular, score: 8.44.
  
     0.462
EHM00423.1
Prephenate dehydratase; KEGG: clj:CLJU_c25500 3.2e-45 pheA1; prephenate dehydratase; Psort location: Cytoplasmic, score: 9.26.
  
     0.437
EHL95353.1
Hypothetical protein; KEGG: ddi:DDB_G0271052 0.0076 CHR group protein; K11647 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4; Psort location: Extracellular, score: 9.64.
  
     0.430
EHL97491.1
Hypothetical protein; KEGG: lfe:LAF_1076 1.7e-06 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase.
  
     0.418
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.