STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97647.1Iron transport-associated domain protein; KEGG: ooe:OEOE_1199 3.2e-07 LysM repeat-containing muramidase; K01185 lysozyme; Psort location: Extracellular, score: 9.65; overlaps another CDS with the same product name. (397 aa)    
Predicted Functional Partners:
EHL97648.1
Iron transport-associated domain protein; KEGG: lfe:LAF_1820 2.2e-05 hypothetical protein; K01185 lysozyme; Psort location: Extracellular, score: 9.65; overlaps another CDS with the same product name.
 
  
 0.971
EHL97649.1
Heme ABC transporter, heme-binding protein isdE.
 
  
 0.945
EHL97651.1
ABC transporter, ATP-binding protein; KEGG: lbr:LVIS_0701 1.2e-61 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.867
EHL97650.1
Putative ferric enterobactin transport system permease protein FepD; KEGG: bgl:bglu_1g28200 2.0e-06 ABC-type cobalamin/Fe3 -siderophores transport systems ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.848
EHL96168.1
Hypothetical protein; KEGG: lbr:LVIS_1825 8.1e-13 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
  
     0.757
EHM01642.1
S-layer domain protein; Psort location: Periplasmic, score: 9.84.
  
     0.747
EHL95353.1
Hypothetical protein; KEGG: ddi:DDB_G0271052 0.0076 CHR group protein; K11647 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4; Psort location: Extracellular, score: 9.64.
  
     0.709
EHL95108.1
Hypothetical protein.
  
     0.683
EHL95350.1
Hypothetical protein; KEGG: afw:Anae109_3812 1.1e-08 dimethyladenosine transferase; K02528 dimethyladenosine transferase; Psort location: Extracellular, score: 8.44.
  
     0.678
EHM01646.1
Hypothetical protein; KEGG: ava:Ava_4725 1.4e-05 polymorphic membrane protein.
  
     0.674
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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