STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97656.1KEGG: llk:LLKF_0723 1.5e-88 cydC; cytochrome d ABC transporter ATP-binding/permease; Psort location: CytoplasmicMembrane, score: 10.00. (426 aa)    
Predicted Functional Partners:
EHL97658.1
Hypothetical protein; KEGG: ljf:FI9785_1764 1.3e-62 cydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EHL97659.1
KEGG: ljf:FI9785_1764 1.2e-68 cydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; Psort location: CytoplasmicMembrane, score: 7.88.
 
0.999
EHL97657.1
Hypothetical protein; KEGG: ljf:FI9785_1763 1.4e-36 cydD; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; Psort location: CytoplasmicMembrane, score: 9.82.
     0.994
EHL97653.1
KEGG: lbr:LVIS_1642 1.9e-198 cytochrome bd-type quinol oxidase, subunit 1; K00425 cytochrome bd-I oxidase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.980
EHL97654.1
KEGG: lbr:LVIS_1641 8.3e-141 cytochrome bd-type quinol oxidase, subunit 2; K00426 cytochrome bd-I oxidase subunit II; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.949
EHM00904.1
KEGG: cat:CA2559_11248 7.5e-37 ABC transporter, ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA.
 
  0.927
EHL98246.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_761 6.2e-168 ABC transporter ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
0.841
EHL96799.1
ABC transporter, ATP-binding protein; KEGG: llk:LLKF_0728 2.3e-145 lmrA; multidrug resistance ABC transporter ATP-binding/permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.817
EHM00266.1
ABC transporter, ATP-binding protein; KEGG: llk:LLKF_0259 1.9e-143 ycfI; multidrug resistance ABC transporter ATP-binding/permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.786
EHL97523.1
KEGG: sub:SUB0102 5.4e-82 1,4-dihydroxy-2-naphthoate octaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.772
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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