STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97563.1Cation diffusion facilitator family transporter; KEGG: mja:MJ_0449 5.0e-24 hypothetical protein; K01529; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (317 aa)    
Predicted Functional Partners:
EHL98013.1
KEGG: lrf:LAR_0185 5.4e-114 L-2-hydroxyisocaproate dehydrogenase; K00016 L-lactate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the LDH/MDH superfamily.
  
    0.526
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
    0.526
EHL96478.1
KEGG: lre:Lreu_0194 1.8e-113 malate dehydrogenase (NAD) K00016; Psort location: Cytoplasmic, score: 9.97; Belongs to the LDH/MDH superfamily.
  
    0.526
EHL97564.1
r3H domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.456
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.