STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97581.1KEGG: lpl:lp_1085 1.9e-118 aroA; 3-deoxy-7-phosphoheptulonate synthase K03856; Psort location: Cytoplasmic, score: 9.97. (338 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
 
 0.999
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
 
 
 0.910
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
 
 0.876
EHM00017.1
KEGG: lfe:LAF_1105 5.9e-60 prephenate dehydrogenase; K04517 prephenate dehydrogenase.
 
 0.860
EHM00028.1
Transporter, major facilitator family protein; KEGG: rcu:RCOM_2110210 1.6e-08 Multidrug resistance protein mdtM, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.757
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
  
 0.756
EHM00423.1
Prephenate dehydratase; KEGG: clj:CLJU_c25500 3.2e-45 pheA1; prephenate dehydratase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.734
EHL97579.1
Glutamine amidotransferase, class I; KEGG: ere:EUBREC_2979 2.9e-51 anthranilate/para-aminobenzoate synthase component II, TrpG; K01658 anthranilate synthase component II; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.715
EHM00020.1
KEGG: sga:GALLO_1481 1.4e-10 putative chorismate mutase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.704
EHL97580.1
KEGG: lpl:lp_1652 5.2e-93 trpE; anthranilate synthase, component I K01657; Psort location: Cytoplasmic, score: 9.26.
    
 0.682
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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