STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97538.1Hypothetical protein; KEGG: amt:Amet_1608 2.5e-38 restriction modification system DNA specificity subunit; K01154 type I restriction enzyme, S subunit. (114 aa)    
Predicted Functional Partners:
EHL97539.1
KEGG: lrl:pLC705_00036 1.6e-231 hsdM1; type I restriction modification system protein HsdMI, M subunit; K03427 type I restriction enzyme M protein.
  
 
 0.972
EHL97383.1
KEGG: lsl:LSL_0916 8.5e-45 hsdS; type I restriction-modification system specificity subunit; K01154 type I restriction enzyme, S subunit.
  
 
 0.883
EHL96999.1
Hypothetical protein; KEGG: lrl:pLC705_00036 1.5e-13 hsdM1; type I restriction modification system protein HsdMI, M subunit; K03427 type I restriction enzyme M protein.
  
 
 0.883
EHL97537.1
Hypothetical protein; KEGG: amt:Amet_1608 8.0e-17 restriction modification system DNA specificity subunit; K01154 type I restriction enzyme, S subunit.
      0.879
EHL97375.1
Hypothetical protein.
  
    0.676
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.609
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.604
EHM01485.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.559
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
   0.419
EHL97536.1
Hypothetical protein.
       0.405
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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