STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97049.1Polysaccharide biosynthesis protein; KEGG: smu:SMU.1785 0.0052 cdsA; putative phosphatidate cytidylyltransferase synthase) K00981; Psort location: CytoplasmicMembrane, score: 10.00. (530 aa)    
Predicted Functional Partners:
EHL97050.1
Acetyltransferase, GNAT family; KEGG: lpl:lp_2360 1.0e-30 ribosomal protein acetylating enzyme K00680; Psort location: Cytoplasmic, score: 9.97.
       0.476
EHM01134.1
Putative S-layer protein; KEGG: sab:SAB0919c 2.0e-06 atl; autolysin; K13714 bifunctional autolysin.
  
     0.452
EHL96649.1
Hypothetical protein.
  
     0.439
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.420
EHM00857.1
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; KEGG: lac:LBA0041 0. ribonucleoside triphosphate reductase; K00527 ribonucleoside-triphosphate reductase; Psort location: Cytoplasmic, score: 8.96.
  
     0.400
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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