STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97058.1ABC transporter, ATP-binding protein; KEGG: snc:HMPREF0837_11960 7.1e-80 ABC superfamily transporter ATP-binding protein; Psort location: Cytoplasmic, score: 9.12. (298 aa)    
Predicted Functional Partners:
EHL97056.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.976
EHL97057.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.970
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.905
EHM00030.1
Arginine ABC transporter, ATP-binding protein ArtM; KEGG: lca:LSEI_A11 3.4e-105 ABC-type polar amino acid transport system, ATPase component; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
     
0.897
EHM01238.1
Glutamine ABC transporter, ATP-binding protein GlnQ; KEGG: lbr:LVIS_1775 1.3e-105 ABC-type polar amino acid transport system, ATPase component; K10041 putative glutamine transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.891
metN-2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    
0.832
EHL95117.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_1685 3.2e-68 ABC transporter ATPase component K02003; Psort location: CytoplasmicMembrane, score: 9.82.
 
    
0.828
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.815
EHL99232.1
KEGG: lsa:LSA1696 2.9e-154 putative glycine/betaine/carnitine ABC transporter, ATP-binding subunit; K02000 glycine betaine/proline transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     
0.772
potA
Putative spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
     
0.735
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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