STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97061.1HTH-type transcriptional activator HxlR domain protein. (66 aa)    
Predicted Functional Partners:
EHL99621.1
HTH-type transcriptional activator HxlR family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.673
EHL97062.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
       0.486
EHL97063.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.486
EHL97064.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.450
EHL97065.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.450
EHL97066.1
Putative ABC transporter, ATP-binding protein EcsA; KEGG: snc:HMPREF0837_11166 2.6e-73 ABC superfamily transporter ATPase.
       0.450
EHL98749.1
Hypothetical protein.
   
    0.412
EHL98763.1
PemK family protein; KEGG: nde:NIDE2509 0.00033 mazF; toxin MazF K07171.
   
    0.412
EHL97830.1
Toxin-antitoxin system, toxin component, MazF family; Toxic component of a type II toxin-antitoxin (TA) system.
   
    0.412
EHL96771.1
PemK-like protein 1 domain protein.
   
    0.412
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.