STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97065.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (265 aa)    
Predicted Functional Partners:
EHL97064.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
     0.994
EHL97066.1
Putative ABC transporter, ATP-binding protein EcsA; KEGG: snc:HMPREF0837_11166 2.6e-73 ABC superfamily transporter ATPase.
 
     0.951
EHL97062.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
       0.709
EHL97063.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.709
EHL95181.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.670
EHL95262.1
Matrixin; KEGG: lpl:lp_2988 4.7e-35 zmp3; extracellular zinc metalloproteinase (putative) K01417.
  
     0.566
EHL95725.1
Hypothetical protein.
  
     0.548
EHL98744.1
Hypothetical protein; KEGG: lpl:lp_3093 0.00027 muramidase (putative) K01185.
  
     0.545
EHL95182.1
DNA-binding helix-turn-helix protein.
  
     0.476
EHL95295.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.453
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.