STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97072.1Hypothetical protein; KEGG: llk:LLKF_2032 5.9e-07 oppF; oligopeptide ABC transporter ATP-binding protein OppF K02032. (65 aa)    
Predicted Functional Partners:
EHL97070.1
ABC transporter, permease protein; KEGG: apb:SAR116_0601 6.6e-29 binding-protein-dependent transport systems inner membrane component K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.995
EHL97071.1
Putative oligopeptide ABC transporter, permease protein AppB; KEGG: psl:Psta_2294 6.0e-44 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.995
EHL97074.1
KEGG: llk:LLKF_2033 4.2e-91 oppD; oligopeptide ABC transporter ATP-binding protein OppD K02031; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.994
EHL97069.1
ABC transporter, substrate-binding protein, family 5; KEGG: sti:Sthe_1622 3.0e-15 4-phytase; Psort location: Periplasmic, score: 9.86.
 
 
 0.985
EHM01254.1
Putative oligopeptide transport system permease protein OppB; KEGG: csc:Csac_1028 7.1e-64 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.946
EHM01256.1
KEGG: llk:LLKF_0402 1.1e-124 optD; oligopeptide ABC transporter ATP-binding protein K02031; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.945
EHM01255.1
KEGG: bmq:BMQ_1717 1.1e-41 nikC; nickel import ABC transporter, permease subunit NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.938
EHL97073.1
KEGG: llk:LLKF_2032 3.9e-88 oppF; oligopeptide ABC transporter ATP-binding protein OppF K02032; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.858
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.695
EHL98776.1
Cobalt transport protein; KEGG: ljf:FI9785_387 0.0064 ABC-type cobalt transport system, permease component, CbiQ related K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.695
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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