STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL97077.1Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00. (480 aa)    
Predicted Functional Partners:
EHL97076.1
Glycosyl hydrolase family 65 central catalytic domain protein; KEGG: lbr:LVIS_0358 0. maltose phosphorylase; K00691 maltose phosphorylase; Psort location: Periplasmic, score: 9.83.
 
    0.793
EHL97078.1
Hypothetical protein.
       0.773
EHL97079.1
Putative fructokinase; KEGG: ooe:OEOE_1708 2.9e-99 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / fructokinase K00847; Psort location: Cytoplasmic, score: 9.97.
       0.500
EHL97075.1
Hypothetical protein; KEGG: bsu:BSU36620 2.7e-25 ywnB; putative oxidoreductase K07118; Psort location: Cytoplasmic, score: 8.96.
       0.430
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.