STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96939.1Hypothetical protein; KEGG: cqu:CpipJ_CPIJ006975 0.0054 vacuolar ATP synthase subunit g; K02152 V-type H+-transporting ATPase subunit G; Psort location: Cytoplasmic, score: 8.96. (217 aa)    
Predicted Functional Partners:
EHL96190.1
Hypothetical protein.
 
      0.862
EHL96304.1
Phage tail tape measure protein, TP901 family; KEGG: edi:EDI_048910 1.8e-13 intracellular protein transport protein USO1; Psort location: OuterMembrane, score: 9.49.
  
     0.770
EHL96893.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.757
EHL96895.1
Peptidase S24-like protein; KEGG: mcl:MCCL_1543 2.6e-11 hypothetical protein; K01356 repressor LexA; Psort location: Cytoplasmic, score: 8.96.
 
     0.726
EHL96938.1
Hypothetical protein.
       0.714
EHL96307.1
Phage minor structural protein.
  
     0.701
EHL96233.1
Glycosyl hydrolase family 25; KEGG: lsa:LSA1788 1.6e-18 putative phage-related 1,4-beta-N-acetyl muramidase (cell wall hydrolase) K01185.
  
     0.661
EHL96189.1
Phage nucleotide-binding protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.657
EHL96899.1
Site-specific recombinase, phage integrase family; KEGG: ccv:CCV52592_1299 3.4e-10 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.642
EHL96290.1
Hypothetical protein.
  
     0.641
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.