STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96830.1Hydrolase, alpha/beta domain protein; KEGG: ddd:Dda3937_01449 1.8e-42 putative lipase/esterase; Psort location: Cytoplasmic, score: 9.26. (283 aa)    
Predicted Functional Partners:
EHM00070.1
NmrA family protein; KEGG: lpl:lp_3239 1.4e-92 oxidoreductase K00540.
 
   0.744
menE
O-succinylbenzoate-CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
 
 0.736
EHM00417.1
KEGG: lfe:LAF_0030 8.6e-52 D-lactate dehydrogenase; K03778 D-lactate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.690
EHL98761.1
NmrA family protein; KEGG: bpu:BPUM_1671 1.0e-46 nucleoside diphosphate glycosyl epimerase; Psort location: Periplasmic, score: 9.51.
  
   0.678
dltC
D-alanine--poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
   
 0.634
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.634
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.634
EHL95607.1
Peptidase M16 inactive domain protein; Overlaps another CDS with the same product name.
    
 
 0.604
EHL95608.1
Peptidase M16 inactive domain protein; Overlaps another CDS with the same product name.
    
 
 0.604
EHM00087.1
Hypothetical protein; KEGG: pfr:PFREUD_23770 3.5e-23 pf2042; putative carboxylic ester hydrolase; Psort location: Cytoplasmic, score: 8.96.
  
     0.591
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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