STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96835.1Glycosyl hydrolase family 2, TIM barrel domain protein; KEGG: lac:LBA1467 1.7e-135 lacL; beta-galactosidase large subunit (lactase) K01190; Psort location: Cytoplasmic, score: 8.96. (315 aa)    
Predicted Functional Partners:
EHL96834.1
KEGG: ppe:PEPE_0204 3.8e-113 beta-galactosidase; K01190 beta-galactosidase.
 
 0.999
EHL96836.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: lpl:lp_3483 1.1e-92 lacL; beta-galactosidase, large subunit K01190; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 2 family.
     0.994
EHM01179.1
Hypothetical protein; KEGG: bde:BDP_2092 7.4e-85 alpha-galactosidase.
 
  
  0.890
EHL98503.1
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose.
  
 
 0.888
EHL99635.1
Putative glucokinase; KEGG: lbr:LVIS_0996 8.6e-123 transcriptional regulator/sugar kinase; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.26.
     
 0.853
EHL96840.1
KEGG: lrl:LC705_00049 1.1e-246 srfJ; O-glycosyl hydrolase; K01201 glucosylceramidase; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 30 family.
  
 
  0.853
uxaC
KEGG: lbr:LVIS_0135 6.9e-185 glucuronate isomerase K01812; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.842
uxaC-2
Glucuronate isomerase; KEGG: lsa:LSA0129 6.9e-224 uxaC; glucuronate isomerase K01812; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.842
EHM01140.1
Hypothetical protein; KEGG: lbr:LVIS_0183 1.7e-09 xylose isomerase K01805.
     
 0.661
EHM01141.1
KEGG: lbr:LVIS_0183 1.2e-130 xylose isomerase K01805; Psort location: Cytoplasmic, score: 9.97.
     
 0.661
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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