STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96867.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
EHL96868.1
Heavy metal-associated domain protein; KEGG: cbt:CLH_3060 2.2e-05 copper-transporting P-type ATPase.
       0.741
EHL96869.1
Copper transport repressor, CopY/TcrY family; KEGG: bcz:BCZK0993 4.1e-13 blaI; beta-lactamase (penicillinase) repressor K07737.
       0.641
EHL96866.1
Hypothetical protein.
       0.590
EHL96870.1
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; KEGG: ctu:Ctu_37370 7.2e-32 gltP; glutamate/aspartate:proton symporter K11102; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.409
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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