STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96790.1NlpC/P60 family protein; KEGG: llk:LLKF_0964 8.9e-18 yjgB; gamma-D-glutamyl-meso-diaminopimelate peptidase I, NlpC/P60 family; Psort location: Extracellular, score: 9.64. (181 aa)    
Predicted Functional Partners:
EHL97723.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: lmh:LMHCC_2846 4.0e-31 autolysin; Psort location: Periplasmic, score: 9.44.
 
  
 0.847
EHL96789.1
Hypothetical protein.
       0.572
EHL96788.1
Hypothetical protein.
       0.409
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.