STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96798.1Hypothetical protein; KEGG: llk:LLKF_0728 5.5e-12 lmrA; multidrug resistance ABC transporter ATP-binding/permease; Psort location: CytoplasmicMembrane, score: 10.00. (106 aa)    
Predicted Functional Partners:
EHL96799.1
ABC transporter, ATP-binding protein; KEGG: llk:LLKF_0728 2.3e-145 lmrA; multidrug resistance ABC transporter ATP-binding/permease; Psort location: CytoplasmicMembrane, score: 10.00.
     0.989
EHL97214.1
Peptidase, C39 family; KEGG: spx:SPG_0480 2.1e-25 blpA; ABC transporter ATP-binding protein BlpA; Psort location: CytoplasmicMembrane, score: 9.82.
   
  0.805
EHL96797.1
Acyltransferase; KEGG: pen:PSEEN1546 9.9e-05 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655; Psort location: CytoplasmicMembrane, score: 9.82.
 
  0.774
EHL96795.1
Acyltransferase; KEGG: ani:AN6139.2 1.9e-07 similar to AF141864_1 AtaAp; K13509 lysophosphatidate acyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  0.771
EHL96796.1
Glycosyltransferase, family 8; KEGG: eam:EAMY_2234 5.8e-22 epsF; putative glycosyl transferase.
 
     0.683
EHL96780.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.629
EHM01096.1
Hypothetical protein.
  
     0.552
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.533
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
   0.533
EHL96800.1
Glycosyltransferase, family 8; KEGG: hip:CGSHiEE_04565 7.4e-10 aspartate-semialdehyde dehydrogenase.
 
     0.504
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.