STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96778.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (229 aa)    
Predicted Functional Partners:
EHL97874.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.919
EHL98930.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lca:LSEI_2680 2.2e-69 signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.671
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.645
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
    0.637
EHL95243.1
Dihydroorotate dehydrogenase 1A; Catalyzes the conversion of dihydroorotate to orotate.
  
    0.603
EHL96779.1
Hypothetical protein.
       0.574
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
    0.456
EHL96780.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.450
EHM00170.1
Putative uracil permease; KEGG: hiq:CGSHiGG_01870 1.0e-73 upp; uracil phosphoribosyltransferase K02824; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.430
pyrB
KEGG: lpl:lp_2703 1.2e-98 pyrB; aspartate carbamoyltransferase catalytic subunit K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.420
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.