STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96773.1Sodium, potassium, lithium and rubidium/H(+) antiporter domain protein; KEGG: ddd:Dda3937_02262 1.4e-44 yjcE; putative cation/proton antiporter K03316; Psort location: CytoplasmicMembrane, score: 10.00. (429 aa)    
Predicted Functional Partners:
EHL96772.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     0.991
EHL96774.1
Hypothetical protein.
       0.648
EHL98432.1
e1-E2 ATPase; KEGG: lbr:LVIS_0116 1.0e-220 cation transport ATPase; K01552; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 
 0.430
EHL97985.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 1.7e-94 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.405
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.