STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96638.1KEGG: lbr:LVIS_1903 5.1e-157 UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (333 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 0.999
galT
KEGG: ooe:OEOE_0303 2.1e-174 galactose-1-phosphate uridylyltransferase K00964; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.999
EHL95699.1
Hypothetical protein.
  
 0.972
EHM00620.1
KEGG: lpj:JDM1_0626 7.1e-112 galU; UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 0.968
EHL98503.1
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose.
  
 
 0.736
EHL99120.1
KEGG: bts:Btus_0864 1.7e-92 dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
0.711
EHL99260.1
Oxidoreductase, NAD-binding domain protein; KEGG: lpl:lp_1161 3.4e-105 oxidoreductase (putative) K00540; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.690
EHL99322.1
NAD dependent epimerase/dehydratase family protein; KEGG: sax:USA300HOU_0349 7.4e-101 dehydrogenase.
  
 0.685
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
  
 0.677
EHL99843.1
Phage transcriptional regulator, RinA family; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.642
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.