STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96641.1KEGG: lbr:LVIS_0595 3.7e-147 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526. (318 aa)    
Predicted Functional Partners:
EHL98576.1
Putative nrdI protein; KEGG: sds:SDEG_0228 3.1e-31 nrdI; flavoprotein NrdI K03647; Psort location: Cytoplasmic, score: 8.96; Belongs to the NrdI family.
 
 0.999
EHL96642.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
 0.999
EHM00857.1
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; KEGG: lac:LBA0041 0. ribonucleoside triphosphate reductase; K00527 ribonucleoside-triphosphate reductase; Psort location: Cytoplasmic, score: 8.96.
  
 0.968
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
 
 0.934
EHL95934.1
Pyruvate kinase; KEGG: lbr:LVIS_0765 7.0e-263 pyruvate kinase; K00873 pyruvate kinase; Psort location: Cytoplasmic, score: 9.97.
     
 0.932
cmk
Cytidylate kinase; KEGG: lsl:LSL_0900 2.8e-69 cmk; cytidylate kinase K00945; Psort location: Cytoplasmic, score: 9.97.
    
 0.928
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.925
EHM01233.1
Guanylate kinase; KEGG: lme:LEUM_1839 9.3e-55 guanylate kinase K00942; Psort location: Cytoplasmic, score: 9.97.
     
 0.902
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
     
 0.902
EHL96643.1
Glutaredoxin; KEGG: ppe:PEPE_1487 4.9e-17 ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit K06191.
 
  
 0.889
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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