STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96657.1KEGG: lbr:LVIS_0611 2.8e-53 acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase; Psort location: Cytoplasmic, score: 8.96. (191 aa)    
Predicted Functional Partners:
EHL96656.1
Universal bacterial protein YeaZ; KEGG: sgo:SGO_0221 6.8e-43 glycoprotein endopeptidase K01409.
  
 
 0.970
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
  
 0.876
EHL96655.1
KEGG: lbr:LVIS_0609 9.0e-57 acyl-ACP thioesterase; K01071 oleoyl-[acyl-carrier-protein] hydrolase; Psort location: Cytoplasmic, score: 8.96.
       0.833
rsmI
S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
   
   0.722
EHL96653.1
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
       0.688
EHL96651.1
Hypothetical protein.
 
     0.671
EHL96652.1
KEGG: lbr:LVIS_0606 9.4e-78 DNA polymerase III subunit delta' K02341; Psort location: Cytoplasmic, score: 9.26.
  
   0.662
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.607
EHL97976.1
Hydrolase, P-loop family; KEGG: rer:RER_19160 4.9e-17 ATPase K06925; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.508
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
    0.407
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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