STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96506.1KEGG: lbr:LVIS_1750 1.4e-184 alpha-L-arabinofuranosidase; K01209 alpha-N-arabinofuranosidase; Psort location: Cytoplasmic, score: 9.97. (509 aa)    
Predicted Functional Partners:
EHL96507.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.893
EHL98999.1
Hypothetical protein.
 
     0.709
EHL95231.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.708
EHM00091.1
Glycosyl hydrolase, family 43; KEGG: llk:LLKF_1620 7.3e-126 araF; alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.707
EHM00441.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.697
EHL96865.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
    0.697
EHM01179.1
Hypothetical protein; KEGG: bde:BDP_2092 7.4e-85 alpha-galactosidase.
 
  
 0.669
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.615
araA-2
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.614
EHL96840.1
KEGG: lrl:LC705_00049 1.1e-246 srfJ; O-glycosyl hydrolase; K01201 glucosylceramidase; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 30 family.
    
 0.612
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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