STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96464.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (340 aa)    
Predicted Functional Partners:
EHL99049.1
Acyltransferase; KEGG: lsl:LSL_1527 5.1e-13 O-acetyl transferase K00680; Psort location: CytoplasmicMembrane, score: 10.00.
     0.713
EHL98933.1
Hypothetical protein; KEGG: naz:Aazo_5355 0.0024 cytochrome c oxidase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.669
EHM00083.1
Acyltransferase; KEGG: bpu:BPUM_0258 3.7e-10 acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.668
EHL96465.1
Hypothetical protein.
       0.623
EHL96466.1
KEGG: bde:BDP_1067 1.4e-44 amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00.
       0.514
EHM01464.1
Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.445
lacD
KEGG: str:Sterm_3960 1.3e-78 tagatose-bisphosphate aldolase K01635; Belongs to the aldolase LacD family.
 
     0.444
EHM01646.1
Hypothetical protein; KEGG: ava:Ava_4725 1.4e-05 polymorphic membrane protein.
  
     0.418
EHL95670.1
Hypothetical protein.
  
     0.409
EHL95334.1
Hypothetical protein; KEGG: eci:UTI89_C1627 0.00032 entS; EntS/YbdA MFS transporter.
  
     0.405
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.