STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96474.1Hypothetical protein; KEGG: fph:Fphi_0143 6.0e-09 ornithine carbamoyltransferase K11074; Psort location: CytoplasmicMembrane, score: 9.82. (132 aa)    
Predicted Functional Partners:
EHL96473.1
Spermidine/putrescine ABC transporter, ATP-binding protein PotA family protein; KEGG: aha:AHA_3987 2.6e-66 sulfate/thiosulfate import ATP-binding protein CysA K02052; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.994
EHL96475.1
Hypothetical protein; KEGG: bcy:Bcer98_1009 1.3e-08 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
     0.994
EHL96477.1
ABC transporter, solute-binding protein.
 
 
  0.992
EHL96476.1
ABC transporter, permease protein; KEGG: gwc:GWCH70_0325 2.4e-17 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.982
EHL98754.1
KEGG: apb:SAR116_1792 7.5e-37 ABC transporter, permease protein, putative K02054; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.960
potA
Putative spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.923
EHL96472.1
Histidinol phosphate phosphatase HisJ family protein; KEGG: lsg:lse_0478 2.3e-51 histidinol phosphatase, putative K04486; Psort location: Cytoplasmic, score: 8.96.
 
     0.876
EHL98751.1
Putative spermidine/putrescine ABC transporter; KEGG: apb:SAR116_2031 1.1e-37 extracellular solute-binding protein, family 1 K11073; Psort location: Periplasmic, score: 9.76.
  
 
 0.840
EHL96478.1
KEGG: lre:Lreu_0194 1.8e-113 malate dehydrogenase (NAD) K00016; Psort location: Cytoplasmic, score: 9.97; Belongs to the LDH/MDH superfamily.
       0.428
EHL98005.1
KEGG: lpl:lp_1324 4.9e-104 sugar ABC transporter, ATP-binding protein (putative); K05816 sn-glycerol 3-phosphate transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
    
 0.418
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.