STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96270.1Toxin-antitoxin system, toxin component, Bro family; Psort location: Cytoplasmic, score: 8.96. (241 aa)    
Predicted Functional Partners:
EHL96298.1
Putative phage head-tail adaptor.
  
     0.751
EHL96268.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 0.00051 dam; adenine-specific DNA methyltransferase K06223.
       0.718
EHL96269.1
Hypothetical protein.
       0.718
EHL96463.1
Methyltransferase domain protein; KEGG: sat:SYN_01163 6.0e-09 SAM-dependent methyltransferase K00599.
  
     0.664
EHL96542.1
Hypothetical protein.
  
     0.643
EHL98992.1
KxYKxGKxW signal domain protein; KEGG: dme:Dmel_CG33103 3.3e-29 Ppn; Papilin; Psort location: Extracellular, score: 9.96.
  
     0.636
EHM01283.1
Hypothetical protein.
  
     0.591
EHL96271.1
Hypothetical protein.
       0.574
EHL96272.1
Hypothetical protein.
       0.574
EHL96290.1
Hypothetical protein.
 
    0.571
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.