STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96287.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (192 aa)    
Predicted Functional Partners:
EHL96286.1
Phage hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.790
EHL96285.1
Hypothetical protein.
       0.773
EHL96283.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.671
EHL96281.1
Hypothetical protein.
       0.670
EHL96282.1
Hypothetical protein.
       0.658
EHL96284.1
Hypothetical protein.
       0.658
EHL96280.1
Hypothetical protein.
  
    0.641
EHL96279.1
Hypothetical protein.
     
 0.590
EHL96288.1
Hypothetical protein.
       0.500
EHL96276.1
Similar to Siphovirus Gp157 protein.
       0.495
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.