STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96293.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86. (54 aa)    
Predicted Functional Partners:
EHL96294.1
Phage portal protein, HK97 family; Psort location: Extracellular, score: 9.64.
       0.741
EHL96295.1
KEGG: lsl:LSL_0284 1.1e-49 clpP; ATP-dependent Clp protease proteolytic subunit K01358; Belongs to the peptidase S14 family.
       0.741
EHL96296.1
Phage major capsid protein, HK97 family; KEGG: bao:BAMF_3086 3.4e-14 seryl-tRNA synthetase seryl-tRNA(Ser/sec) synthetase; serine-tRNA ligase; SerRS.
       0.741
EHL96291.1
Phage terminase, small subunit, P27 family.
       0.590
EHL96292.1
Putative phage terminase, large subunit.
       0.590
EHL96297.1
Hypothetical protein.
       0.522
EHL96298.1
Putative phage head-tail adaptor.
       0.522
EHL96299.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.522
EHL96300.1
Hypothetical protein.
       0.522
EHL96301.1
Phage major tail protein; KEGG: lbr:LVIS_0144 0.00062 6-phosphogluconate dehydrogenase-like protein; K00033 6-phosphogluconate dehydrogenase.
       0.522
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.