STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96229.1Hypothetical protein; KEGG: sha:SH1364 0.0097 pbp3; penicillin-binding protein 3; K12553 penicillin-binding protein 3; Psort location: Extracellular, score: 9.64. (240 aa)    
Predicted Functional Partners:
EHM00156.1
Hypothetical protein; KEGG: lac:LBA0183 4.9e-06 DNA polymerase; Psort location: Extracellular, score: 9.65.
  
 0.901
EHL98591.1
Bacterial group 3 Ig-like protein; KEGG: lsg:lse_0353 0.0099 cell wall surface anchor family protein, putative.
  
 0.901
EHL98604.1
Hypothetical protein; KEGG: llk:LLKF_0731 7.0e-40 yhcA; ABC transporter ATP-binding protein/permease; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.896
EHL96310.1
Hypothetical protein.
  
   
0.758
EHL98603.1
KEGG: llk:LLKF_0731 3.1e-95 yhcA; ABC transporter ATP-binding protein/permease; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.742
EHL95641.1
ABC transporter, ATP-binding protein.
  
 
 0.742
EHL95112.1
KEGG: bde:BDP_1105 5.0e-79 ABC transporter, ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.742
EHL95117.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_1685 3.2e-68 ABC transporter ATPase component K02003; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.742
EHL96230.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
       0.620
EHM00184.1
ABC transporter substrate binding protein.
    
  0.598
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.