STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96243.1Putative LL-diaminopimelate aminotransferase; KEGG: lpl:lp_0339 2.0e-169 transaminase K08969; Psort location: Cytoplasmic, score: 9.97. (381 aa)    
Predicted Functional Partners:
EHL99763.1
Putative glutamate synthase [NADPH], large subunit; KEGG: lca:LSEI_2556 0. glutamate synthase domain-containing 3; K00265 glutamate synthase (NADPH/NADH) large chain; Psort location: Cytoplasmic, score: 9.26.
    
 0.934
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
 0.915
EHL98934.1
Putative homocysteine S-methyltransferase; KEGG: lpl:lp_1298 1.8e-81 mmuM; homocysteine methyltransferase K00547; Psort location: Cytoplasmic, score: 9.26.
   
 
  0.902
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
   
 
  0.899
EHL95934.1
Pyruvate kinase; KEGG: lbr:LVIS_0765 7.0e-263 pyruvate kinase; K00873 pyruvate kinase; Psort location: Cytoplasmic, score: 9.97.
   
 0.867
EHM00399.1
Putative LL-diaminopimelate aminotransferase; KEGG: bca:BCE_4102 7.1e-80 transaminase; K08969 aminotransferase; Psort location: Cytoplasmic, score: 9.26.
  
  
 
0.864
EHL96173.1
Methionine synthase, vitamin-B12 independent; KEGG: llm:llmg_1849 3.8e-120 metE2; hypothetical protein K00549; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.859
EHL95188.1
Hypothetical protein; KEGG: llm:llmg_1849 1.0e-46 metE2; hypothetical protein K00549; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.859
EHL99022.1
Glutamate-cysteine ligase; KEGG: lbr:LVIS_1590 1.5e-143 gamma-glutamylcysteine synthetase; K01919 glutamate--cysteine ligase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.829
EHL97102.1
Hydrolase, carbon-nitrogen family; KEGG: bce:BC4034 1.3e-57 nitrilase K08590; Psort location: Cytoplasmic, score: 9.26.
 
 0.818
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.