STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96248.1Hydratase/decarboxylase; KEGG: lpl:lp_3666 1.2e-79 2-oxo-hept-3-ene-1,7-dioate hydratase; 2-oxo-hept-4-ene-1,7-dioate hydratase K02509. (277 aa)    
Predicted Functional Partners:
EHM01617.1
KEGG: ooe:OEOE_1723 1.3e-151 2-isopropylmalate synthase K01649; Psort location: Cytoplasmic, score: 9.97; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.783
EHL98722.1
FAH family protein; KEGG: lpl:lp_0931 2.2e-53 hpaG; 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase (putative); Psort location: Cytoplasmic, score: 9.26.
  
 
 0.720
EHL95902.1
KEGG: lbr:LVIS_0898 1.1e-21 4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase.
    
 0.670
EHL98538.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
    0.656
EHM00422.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
    0.625
EHL99720.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
    0.623
EHL95234.1
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
 
 
 0.584
EHL96247.1
Putative DNA polymerase IV; KEGG: bao:BAMF_1825 6.8e-75 uvrX3; lesion bypass phage DNA polymerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DNA polymerase type-Y family.
 
     0.567
EHM01228.1
Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
  
 
 0.527
EHL98593.1
Tautomerase enzyme family protein; KEGG: mdi:METDI2918 5.6e-32 4-oxalocrotonate tautomerase.
    
 0.508
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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