STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96163.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (102 aa)    
Predicted Functional Partners:
EHL96162.1
Putative poly-beta-1,6 N-acetyl-D-glucosamine synthase; KEGG: bmq:BMQ_3833 5.4e-66 glycosyl transferase, family 2; Psort location: CytoplasmicMembrane, score: 10.00.
       0.788
EHL96164.1
KEGG: bmd:BMD_3822 1.0e-23 polysaccharide deacetylase.
       0.776
EHL96161.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: asu:Asuc_0859 1.8e-49 glycoside hydrolase family protein; K12373 beta-hexosaminidase; Psort location: Periplasmic, score: 9.44.
       0.661
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.