STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96156.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (53 aa)    
Predicted Functional Partners:
EHL96155.1
Hypothetical protein; KEGG: snc:HMPREF0837_11378 5.6e-05 ABC superfamily transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.543
EHL96107.1
KEGG: lfe:LAF_0938 6.1e-42 pyridoxal kinase; K00868 pyridoxine kinase; Psort location: Cytoplasmic, score: 8.96.
       0.497
EHL96108.1
TIGR01440 family protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0340 family.
       0.497
EHL96109.1
Putative rod shape-determining protein MreD; KEGG: fma:FMG_0356 4.6e-05 hypothetical protein; K00805 heptaprenyl diphosphate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.497
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.