STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96119.1Hypothetical protein. (617 aa)    
Predicted Functional Partners:
EHL95604.1
Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
    
  0.868
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.855
scpA
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.809
EHL96120.1
Glycosyltransferase, group 1 family protein; KEGG: lre:Lreu_0080 2.1e-126 hypothetical protein; K00712 poly(glycerol-phosphate) alpha-glucosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
   0.695
EHL96121.1
Glycosyltransferase, group 1 family protein; KEGG: lpj:JDM1_2280 1.5e-109 tagE5; poly(glycerol-phosphate) alpha-glucosyltransferase; K00712 poly(glycerol-phosphate) alpha-glucosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
   0.695
EHL99855.1
Hypothetical protein.
  
 
 0.666
EHL96122.1
Hypothetical protein.
       0.615
EHL96123.1
Hypothetical protein; KEGG: oaa:100083347 7.5e-10 similar to citron; K08282 non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 8.96.
      
0.574
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.551
EHM00148.1
KEGG: ppe:PEPE_0562 6.7e-226 ATP-dependent DNA helicase RecQ K03654; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.539
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.