STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL96019.1KEGG: lwe:lwe1833 1.3e-133 DAK2 domain-containing protein K07030. (513 aa)    
Predicted Functional Partners:
EHL95873.1
EDD domain protein, DegV family; KEGG: mga:MGA_1184 1.4e-19 DegV-like protein; Psort location: Cytoplasmic, score: 8.96.
   0.993
EHL95912.1
EDD domain protein, DegV family; KEGG: mga:MGA_1184 1.8e-14 DegV-like protein; Psort location: Cytoplasmic, score: 8.96.
   0.993
EHL96839.1
EDD domain protein, DegV family; KEGG: mga:MGA_1184 5.3e-16 DegV-like protein.
   0.989
EHL98517.1
EDD domain protein, DegV family; KEGG: mga:MGA_1184 2.0e-12 DegV-like protein.
   0.987
EHL96018.1
Hypothetical protein.
 
  
 0.970
EHL98521.1
EDD domain protein, DegV family.
 
   0.903
EHL95830.1
Hypothetical protein; KEGG: bsu:BSU15840 6.7e-06 yloV; putative dihydroxyacetone/glyceraldehyde kinase K07030.
       0.757
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
 
    0.703
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
  
    0.597
EHL96068.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
   
    0.473
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.