STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAPeptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (177 aa)    
Predicted Functional Partners:
EHL95853.1
methionine-R-sulfoxide reductase; KEGG: lbr:LVIS_0809 1.9e-31 peptide methionine sulfoxide reductase domain-containing protein; K07305 peptide-methionine (R)-S-oxide reductase; Psort location: Cytoplasmic, score: 9.26.
 
 0.998
EHM01461.1
Thioredoxin; KEGG: edi:EDI_037950 1.2e-11 thioredoxin-1.
   
 0.898
EHL98217.1
Hypothetical protein.
   
 0.890
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.886
EHL96643.1
Glutaredoxin; KEGG: ppe:PEPE_1487 4.9e-17 ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit K06191.
  
 
 0.845
EHL99739.1
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain protein; KEGG: lbr:LVIS_2026 1.1e-72 ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.97.
 
  
   0.768
EHM00941.1
Transcriptional regulator, Sir2 family; KEGG: lre:Lreu_0208 3.8e-74 NAD-dependent deacetylase; K12410 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 9.26.
 
      0.627
EHL95109.1
KEGG: lbr:LVIS_2003 1.8e-58 glutathione peroxidase; K00432 glutathione peroxidase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.554
mprF
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
     
 0.507
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 
 0.488
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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