STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95857.1CotH protein. (633 aa)    
Predicted Functional Partners:
EHM01627.1
Matrixin; KEGG: lpl:lp_0600 3.7e-12 zmp2; extracellular zinc metalloproteinase (putative) K01417.
  
     0.754
EHL95859.1
VTC domain protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.733
EHL95858.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.725
EHM01642.1
S-layer domain protein; Psort location: Periplasmic, score: 9.84.
  
     0.697
EHL96168.1
Hypothetical protein; KEGG: lbr:LVIS_1825 8.1e-13 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
  
     0.670
EHM01628.1
Hypothetical protein; KEGG: lbr:LVIS_1825 1.4e-06 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: Extracellular, score: 9.65.
  
   
 0.634
EHL99247.1
KEGG: lhe:lhv_1925 3.7e-202 biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit; Psort location: Cytoplasmic, score: 9.97.
    
  0.629
EHL99245.1
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
  0.626
EHL96257.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.527
EHL96784.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.479
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.