STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95873.1EDD domain protein, DegV family; KEGG: mga:MGA_1184 1.4e-19 DegV-like protein; Psort location: Cytoplasmic, score: 8.96. (301 aa)    
Predicted Functional Partners:
EHL96019.1
KEGG: lwe:lwe1833 1.3e-133 DAK2 domain-containing protein K07030.
   0.993
EHL95874.1
Transcriptional regulator, MarR family.
       0.804
EHL95830.1
Hypothetical protein; KEGG: bsu:BSU15840 6.7e-06 yloV; putative dihydroxyacetone/glyceraldehyde kinase K07030.
  
   0.714
EHL95875.1
Fibronectin-binding domain protein.
       0.658
EHL96018.1
Hypothetical protein.
 
    0.644
EHL97060.1
Hypothetical protein; KEGG: bsu:BSU15840 3.8e-05 yloV; putative dihydroxyacetone/glyceraldehyde kinase K07030; Psort location: Cytoplasmic, score: 8.96.
 
   0.625
dinG
DnaQ family exonuclease/DinG family helicase; 3'-5' exonuclease.
  
    0.488
EHL95872.1
Hypothetical protein; KEGG: rpr:RP216 0.0011 cytochrome d ubiquinol oxidase subunit I (CydA); K00425 cytochrome bd-I oxidase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
       0.410
rex
Redox-sensing transcriptional repressor rex family protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
  
   
 0.406
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.