STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95889.1Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_0851 1.1e-241 membrane carboxypeptidase (penicillin-binding protein); K05366 penicillin-binding protein 1A. (764 aa)    
Predicted Functional Partners:
EHM00757.1
Hypothetical protein; KEGG: lre:Lreu_0587 4.7e-22 peptidoglycan glycosyltransferase K08724; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.964
EHM01475.1
Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_1489 1.0e-215 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
0.922
gpsB
DivIVA domain protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
 
 
 
 0.922
EHL99631.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: efa:EF2857 4.9e-120 penicillin-binding protein 2B; K00687 penicillin-binding protein 2B.
 
 
 0.917
EHM00503.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lbr:LVIS_2055 1.5e-70 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S11 family.
   
 
 0.911
EHL99141.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lbr:LVIS_1825 2.1e-119 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S11 family.
  
 
 0.904
EHL95965.1
KEGG: lpj:JDM1_1672 1.4e-69 lytH; N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
   
 0.899
EHL99327.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lbr:LVIS_0271 5.3e-75 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the peptidase S11 family.
  
 
 0.887
recU
Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
 0.825
EHM00756.1
Penicillin-binding protein 2B family protein; KEGG: lre:Lreu_0587 4.1e-139 peptidoglycan glycosyltransferase K08724; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
0.815
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.