STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95937.1Hydrolase, alpha/beta domain protein; KEGG: bmd:BMD_2498 3.3e-27 alpha/beta fold family hydrolase; Psort location: CytoplasmicMembrane, score: 8.46. (297 aa)    
Predicted Functional Partners:
EHM00088.1
Glycerophosphodiester phosphodiesterase family protein; KEGG: lca:LSEI_1733 9.3e-110 glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.888
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.878
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.875
dltC
D-alanine--poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
  
 0.853
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 0.853
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.853
EHM00070.1
NmrA family protein; KEGG: lpl:lp_3239 1.4e-92 oxidoreductase K00540.
  
   0.784
EHL98761.1
NmrA family protein; KEGG: bpu:BPUM_1671 1.0e-46 nucleoside diphosphate glycosyl epimerase; Psort location: Periplasmic, score: 9.51.
  
   0.784
EHM01235.1
KEGG: lbr:LVIS_1777 1.6e-27 hypothetical protein; K01183 chitinase.
    
   0.782
EHL95938.1
ATPase family; KEGG: sax:USA300HOU_0933 3.4e-73 clpB; endopeptidase ClpB K03695; Psort location: Cytoplasmic, score: 9.97.
       0.693
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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