STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95938.1ATPase family; KEGG: sax:USA300HOU_0933 3.4e-73 clpB; endopeptidase ClpB K03695; Psort location: Cytoplasmic, score: 9.97. (239 aa)    
Predicted Functional Partners:
EHL95939.1
Putative chaperone protein ClpB; KEGG: sax:USA300HOU_0933 4.9e-168 clpB; endopeptidase ClpB K03695; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family.
     0.993
EHL97432.1
Hypothetical protein; KEGG: sax:USA300HOU_2542 5.9e-19 clp; endopeptidase Clp K04086.
 
      0.895
EHL98544.1
ATPase, AAA family; KEGG: snc:HMPREF0837_11672 1.8e-131 clpE; ATP dependent protease K03697; Psort location: Cytoplasmic, score: 9.97; Belongs to the ClpA/ClpB family.
 
    
0.826
clpP
Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
 0.815
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.804
EHL99833.1
Hypothetical protein.
  
 
 0.794
EHL98654.1
Hypothetical protein.
  
 
 0.794
EHL96295.1
KEGG: lsl:LSL_0284 1.1e-49 clpP; ATP-dependent Clp protease proteolytic subunit K01358; Belongs to the peptidase S14 family.
   
 
 0.783
mecA
Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
    
 
 0.744
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
 
 0.701
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.