STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHL95965.1KEGG: lpj:JDM1_1672 1.4e-69 lytH; N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase. (280 aa)    
Predicted Functional Partners:
EHM00081.1
NlpC/P60 family protein.
  
 
 0.953
EHL97723.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: lmh:LMHCC_2846 4.0e-31 autolysin; Psort location: Periplasmic, score: 9.44.
 
 
 0.943
EHL97722.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: lmh:LMHCC_2846 4.3e-34 autolysin.
 
 
 0.942
EHL95604.1
Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
 
  
  0.941
EHL98595.1
NlpC/P60 family protein; KEGG: bsu:BSU09420 2.9e-28 lytE; cell wall hydrolase; phosphatase-associated protein (major autolysin); Psort location: Extracellular, score: 9.65.
  
 
 0.930
EHM01111.1
Hypothetical protein.
    
 0.927
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.920
EHM00434.1
KEGG: lbr:LVIS_1883 4.6e-53 N-acetylmuramoyl-L-alanine amidase; K01227 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01447.
    
 0.915
EHL98339.1
KEGG: lbr:LVIS_1883 1.5e-102 N-acetylmuramoyl-L-alanine amidase; K01227 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01447; Psort location: Extracellular, score: 9.65.
    
 0.915
EHM00437.1
Glycosyl hydrolase family 25; KEGG: lpl:lp_3093 2.5e-32 muramidase (putative) K01185.
  
 
 0.914
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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